scfocus.utils.read_uploaded_file

scfocus.utils.read_uploaded_file(uploaded_file)

Read a single uploaded file and return an AnnData object.

Parameters:

uploaded_file (UploadedFile) – Uploaded file object from Streamlit.

Returns:

adata – Annotated data matrix if successful, None otherwise.

Return type:

anndata.AnnData or None

Notes

Currently only supports .h5ad format. Other formats will produce an error message.